Reading and checking an answer
Trace each claim back to the source passage. Charlie shows what it searched, what it kept and what it cites.
Emerit Science Team
To check an answer, take these four steps.
- 1 Open the search card: were the right sources queried, with the right queries?
- 2 Hover over the citations: does the cited text say what the sentence claims?
- 3 Click the citation: read the passage in context, in the PDF.
- 4 Look at the nature of the source: review or original study, year, sample size.
Also read the end of the answer: Charlie may point out its limits there, for example a synthesis based mostly on reviews.
1. The search card
Click “+”, to the right of the card, to see what Charlie searched. This detail is open during the search. It is collapsed when you reopen a session.
Read the summary first. For example, “4 channels · 290 → 25 kept” means: four ways of searching, 290 documents gathered, 25 kept to write the answer. These figures change with every question.
The channels
- “Vector search” compares the meaning of the query with that of the texts.
- “Keyword search” looks for the terms of the query. “MeSH expansion” shows the MeSH descriptors added.
- “Highly cited articles” adds articles cited at least 100 times that contain these terms.
- “PubMed search” queries PubMed. “PubMed query executed (ATM/MeSH)” shows the query as PubMed understood it.
Depending on the question, you will also see “Recent articles”, “Author search”, “Article lookup” or “Full text”.
Under each channel, you read the query that was run and its number of results. A link such as “+2 variant(s)” unfolds the other wordings that were tried. When a small arrow follows the total, as in “152 documents total”, a click lists the documents, with a link to each one.
The last line gives the outcome, for example “Merged & reranked — 290 → 25 documents sent to writer”. The results are combined, then reranked by relevance. An article found by two channels counts only once. Only the retained documents are used to write the answer.
With PMC full text, the title becomes “Emerit Corpus Search · PMC full text” and the last line counts passages.
Each queried source has its own card: “Internet search”, “Library search” followed by the library name, “Patent search”.
The card says what was queried for this answer. The row of sources, under the input field, says what will be queried for the next question.
What to look for
- Do the queries reuse the terms of your question?
- Does each checked source have its card? “Source set aside for this question” indicates it was not queried.
- “channel failed” indicates a channel that could not return anything.
- On a follow-up question, a message such as “3 articles already cited above, re-read — no new search” indicates that Charlie did not run a new search.
2. “Tools used”
Read this line, under the card: it lists what Charlie ran for this answer. Tools are added to it as they go, before the first word of the text.
- “Article search”: a search in the literature.
- “Previously cited articles”: Charlie re-read the articles from the conversation.
- “Full-text reading”: it read beyond the abstract.
- “Web search”: it consulted the Internet.
- “Patent search query”: it prepared a patent query.
This line may be missing: some searches, such as an in-depth analysis of a library, do not appear in it. The search card remains the reference.
3. The citations
Hover over a citation to read what it cites, without leaving the answer.
A citation is written “Author et al., year”, such as “Zhao et al., 2021”.
A superscript, as in “Zhang et al., 2025§1”, designates a specific passage of the article. The numbers follow reading order: §1 is the highest passage.
Without a superscript, the citation refers to the whole article, and hovering shows its abstract.
The text is shown in its original language. Compare it with the sentence in the answer: this is where an overly broad interpretation shows.
Hovering is only available once the writing is finished. While the answer is being written, a click already opens the source.
4. Open the source
Click a citation to open its source to the right of the answer. What opens depends on the citation.
- With a § superscript: the PDF opens directly on the highlighted passage, if the article has a PDF available.
- Without a superscript: the article's record opens in the Sources panel.
The Sources panel
In this panel, view the answer's references, under “Cited sources” then “Other sources”. The latter were found without being cited in the text.
Each reference gives its number, the author and year, the source database, the title, and its DOI, PMID or PMCID links. The arrow on the right opens its record: retrieved text, number of citations, journal, article type.
- The eye opens the PDF, when it is available.
- “Save” files the article in one of your libraries. This button requires an available PDF.
- “Request” appears when the PDF is missing. Your request is recorded with the Emerit team, with no guarantee of obtaining the article.
- The quotation mark icon opens the “Citation” window: AMA, APA, MLA and NLM formats, and “Copy citation”.
- “Analyze in Biodata” appears when the article is linked to a GEO dataset. It creates a Biodata project from that dataset. Premium and Team plans.
The “Notes” tab, next to “Sources”, keeps your notes within reach: see Organizing your work.
The PDF, on the highlighted passage
Read the passage in the reader: it opens at the right page, with the cited text highlighted.
Also read what comes before and after: the context confirms or qualifies the sentence in the answer.
“Back to cited passage” takes you back to the highlight if you have scrolled through the document. The arrow at the top left, “References list”, goes back to the panel.
The reader also lets you change pages, zoom, search the document and download it. For a corpus article, “Save to a library” appears at the bottom.
When the passage is not highlighted
- PDF opened with the eye: all the passages found by the search are highlighted, if there are any.
- PDF from a source other than PMC or your libraries, such as HAL: it opens without highlighting.
- Article with no PDF available: you stay on its record.
- Word, PowerPoint, Excel, OpenDocument: these formats have no built-in reader. The document is downloaded, with no highlighted passage.
To highlight and annotate yourself, see Reading and annotating PDFs.
5. The bar under the answer
Use the icons under each answer, from left to right.
- “Counter”: the durations (“Search”, “First word”, “Perceived wait”, “Writing time”) and the volume of text processed (“Input tokens”, “Output tokens”).
- “Filters”: the filters and sub-sources applied to this answer. The icon is grayed out if there are none.
- “Copy”: the text of the answer. Citations keep the author and year, without the passage number.
- “Helpful” and “Not helpful”: your opinion of the answer.
- “Export as PDF”: the answer and its sources. A team's administrator can disable this export.
- “Sources”: opens or closes the panel of the same name.
Under the last answer, “Regenerate response” reruns your last question.
To export a session as RIS, CSV or PDF, use the “Actions” menu: see Organizing your work.
A citation is not enough
It proves that the text exists, not that it is correctly interpreted. The application reminds you of this under the conversation: “Consider verifying important information.”
Check for yourself
Create a free account, ask a question and trace it back to the source passage.
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